Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PCPG rs62052168 chr16:89947203 G/A 0.000183 175 25.87 20.2 36.37 KM Plot
PCPG rs62052174 chr16:89950901 G/A 0.000157 176 25.77 21.5 36.37 KM Plot
PCPG rs62052180 chr16:89963289 C/G 0.000157 175 25.87 21.5 36.37 KM Plot
PCPG rs62052183 chr16:89966921 C/A 0.000157 175 25.87 21.5 36.37 KM Plot
PCPG rs62052185 chr16:89969254 C/T 0.000157 175 25.87 21.5 36.37 KM Plot
PCPG rs62052186 chr16:89969567 A/T 0.000167 175 25.87 20.28 36.37 KM Plot
PCPG rs62052187 chr16:89973071 G/A 0.000153 175 25.87 20.37 36.37 KM Plot
PCPG rs62052189 chr16:89975555 G/C 0.00018 173 25.87 20.28 36.37 KM Plot
PCPG rs62052210 chr16:89980158 A/G 0.000156 176 25.87 20.28 3.17 KM Plot
PCPG rs62052212 chr16:89981960 G/A 0.000167 175 25.87 20.28 36.37 KM Plot
PCPG rs62052213 chr16:89991963 C/T 1.11E-16 171 25.87 20.28 3.17 KM Plot
PCPG rs62052222 chr16:90016228 C/G 1.64E-8 170 25.6 20.17 6.62 KM Plot
PCPG rs62052223 chr16:90018186 T/C 1.64E-8 171 25.53 20.17 6.62 KM Plot
PCPG rs62052226 chr16:90022137 T/C 1.45E-8 171 25.67 20.17 6.62 KM Plot
PCPG rs62052239 chr16:90024866 C/T 1.23E-8 172 25.6 20.28 6.62 KM Plot